Search results for "molecular identification"
showing 10 items of 15 documents
Give me a sample of air and I will tell which species are found from your region : Molecular identification of fungi from airborne spore samples
2017
Fungi are a megadiverse group of organisms, they play major roles in ecosystem functioning and are important for human health, food production and nature conservation. Our knowledge on fungal diversity and fungal ecology is however still very limited, in part because surveying and identifying fungi is time demanding and requires expert knowledge. We present a method that allows anyone to generate a list of fungal species likely to occur in a region of interest, with minimal effort and without requiring taxonomical expertise. The method consists of using a cyclone sampler to acquire fungal spores directly from the air to an Eppendorf tube, and applying DNA barcoding with probabilistic specie…
On the Occurrence of the Invasive Freshwater Limpet Ferrissia californica (Mollusca: Gastropoda: Planorbidae) in Japan.
2018
Two members of the genus Ferrissia Walker, 1903, namely Ferrissia nipponica (Kuroda, 1949) and F. japonica Habe and Burch, 1965, have been reported to occur in Japan, but due to a lack of molecular data, doubts have been expressed as to their validity. Furthermore, the possible presence of allochthonous Ferrissia taxa has been stated under a variety of names, so that even now there is no consensus on their presence and identity. Recently, freshwater limpets belonging to the planorbid genus Ferrissia were collected in an irrigation trough on the Izu island of Hachijōjima, Tokyo, Japan. Molecular identification of the collected specimens, based on a fragment of the large ribosomal subunit 16S…
Pistachio fruits rust caused by Tuberculina persicina (Ditmar) Sacc., anamorph of Helicobasidium purpureum (Tul.) Pat.
2020
In the study, we found rust in pistachio fruits and verified that it was caused by Tuberculina persicina, anamorph of Helicobasidium purpureum, through isolation and culture, microscopic observation, molecular identification and pathogenicity tests of Koch’s postulates. To our knowledge, this is the first report of rust fruit in pistachio caused by Tuberculina persicina.
The molecular identification of organic compounds in the atmosphere: state of the art and challenges.
2015
SSCI-VIDE+ATARI:CARE+BNO:BDA; International audience
Lipolytic activity of the yeast species associated with the fermentation/storage phase of ripe olive processing.
2010
9 páginas, 4 figuras, 5 tablas.-- El Pdf del artículo es la copia de autor.
Cryptic invasion in Southern Europe: The case of Ferrissia fragilis (Pulmonata: Ancylidae) Mediterranean populations
2011
Four populations of the North American ancylid gastropod Ferrissia fragilis have been found in Southern Italy, thus expanding the known Eurasian distribution range of this invasive gastropod to the Mediterranean area. Both mitochondrial markers used for the molecular identification of the sampled specimens (16S and COI) showed a modest to absent haplotypic diversity in the studied Ferrissia populations from Europe and Asia, and their perfect identity with some of the haplotypes observed in North American F. fragilis populations. In the light of the scarce molecular diversity observed in the whole Palaearctic area and of the growing evidences for the ongoing spreading of the species in Europ…
First record of the tadpole shrimp triops cancriformis (Branchiopoda, Notostraca) in Cyprus
2014
The presence of the large branchiopod Triops cancriformis (Bosc, 1801-1802) in Cyprus is reported for the first time. Triops cancriformis individuals were observed in the large temporary wetland of Paralimni Lake (Famagusta District, Cyprus) during the wet periods of 2013 and 2014. This finding extends the current knowledge of the species distribution in the eastern Mediterranean area, and stresses the ecological and conservation value of the unique habitat of Paralimni Lake. In addition, it highlights the need for carrying on further studies on the fauna of temporary pond habitats in Cyprus, and for better conservation management strategies for such EU priority habitats.
Optimization of the preanalytical steps of matrix-assisted laser desorption ionization-time of flight mass spectrometry identification provides a fle…
2012
ABSTRACT We report here that modifications of the preanalytical steps of matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) identification of yeasts, with regard to the original protocol provided by the manufacturers, appear to be efficient for the reliable routine identification of clinical yeast isolates in medical laboratories. Indeed, when one colony was sampled instead of five and the protein extraction protocol was modified, the performance of MALDI-TOF MS was superior to that of the API ID 32C method (discrepancies were confirmed by using molecular identification), allowing the correct identification of 94% of the 335 clinical isolates prospec…
Evaluation of criteria for species delimitation of bagworm moths (Lepidoptera: Psychidae)
2014
Accurate identification of species is fundamental for biological research and necessary for species conservation. DNA bar- coding is particularly useful when identification using morphological characteristics is laborious and/or unreliable. However, bar- codes for species are dependent on the availability of reference sequences from correctly identified specimens. The traditional use of morphology to delimit the species boundaries of Finnish bagworm moths (Lepidoptera: Psychidae: Naryciinae: Dahliciini) is contro- versial because there is overlap in their morphological characteristics. In addition, there are no suitable molecular markers. We veri- fied the delimitation of seven out of eight…